Dethiobiotin synthase

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August undefined, 2024

WebOct 15, 1998 · The crystal structure of the 224-residue protein dethiobiotin synthetase from Escherichia coli has been refined using X-ray diffraction data at 0.97 A resolution at 100 K. The model, consisting of 4143 protein atoms including 1859 H atoms and 436 solvent sites, was refined to a final R factor of 11.6% for all reflections, and has an estimated ... WebJan 11, 2024 · BioD, dethiobiotin synthase In contrast to the preceding enzymes (with the exception of BioU), BioD (DTB synthase) catalyzes an unusually interesting step. This is the mechanistically unusual reaction of ATP (or CTP) dependent insertion of CO 2 between the N7 and N8 nitrogen atoms of DAPA to form the ureido moiety of biotin.

Inhibition of Mycobacterium tuberculosis Dethiobiotin …

WebDethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin] WebMar 28, 1995 · One of these enzymes, ATP-dependent dethiobiotin synthetase, catalyzes the carboxylation of 7,8-diaminopelargonic acid leading to the formation of the ureido ring of biotin. The enzyme belongs to the class of ATP-dependent carboxylases and we present here the first crystal structure determined for this class of enzyme. flannel and cowboy boots men

Information on EC 6.3.3.3 - dethiobiotin synthase

WebJan 23, 2007 · Dethiobiotin synthase 1 UniRule annotation. Gene names. Name. bioD1 UniRule annotation. Ordered locus names. b0778, JW0761. Organism names. Organism. Escherichia coli (strain K12) Taxonomic identifier. 83333 NCBI. Taxonomic lineage. Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > … WebApr 7, 1999 · Biotin synthase, the enzyme which catalyses the conversion of dethiobiotin (DTB) to biotin has an absolute requirement for S-adenosylmethionine (AdoMet) which is … flannel and dress date outfit

M-CSA Mechanism and Catalytic Site Atlas

RCSB PDB - 7JT5: Mycobacterium tuberculosis dethiobiotin …

Webd-Desthiobiotin; d-Desthiobiotin is used in affinity chromatography and protein chromatography. d-Desthiobiotin can be used for protein labeling, detection and isolation. Webdethiobiotin synthase. Gene provides a unified query environment for genes defined by sequence and/or in NCBI's Map Viewer. bioD dethiobiotin synthase [] Gene ID: 1245251, discontinued on 29-Dec-2024. Summary. Other designations. dethiobiotin synthase ... flannel and cowboy bootsWebJan 11, 2024 · Biotin synthase belongs to the radical SAM superfamily and contains the signature Cys-X-X-X-Cys-X-X-Cys motif sequence required for [4Fe-4S] cluster binding. … flannel and corduroy blazer baby

"WebDethiobiotin synthetase Methods Enzymol. 1979;62:348-52. doi: 10.1016/0076-6879 (79)62241-3. Authors M A Eisenberg , K Krell PMID: 374977 DOI: 10.1016/0076-6879 … " - Dethiobiotin synthase

Dethiobiotin synthase

Biotin synthase: Insights into radical-mediated carbon–sulfur bond ...

WebJul 1, 2007 · KAPA synthase from A. thaliana was localized in the cytosol by confocal microscopy of the GFP-fused enzyme and by Western blotting (Pinon et al., 2005). Sequence homologs of the bacterial 7,8-diaminopelargonic acid (DAPA) aminotransferase and dethiobiotin synthase exist in the A. thaliana genome (Pinon et al., 2005). WebThis article is published in Journal of the American Chemical Society.The article was published on 1952-06-01. It has received 43 citation(s) till now.

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WebMay 1, 2005 · Biotin synthase is an S-adenosyl-L-methionine (SAM) radical enzyme that inserts sulfur into dethiobiotin to produce biotin. The reaction proceeds through 5′-deoxyadenosyl radical intermediates that become reduced during the sulfur insertion step to give another product of the reaction, 5′-deoxyadenosine. We report that Escherichia coli … WebMay 1, 2016 · The function of biotin synthase is to convert dethiobiotin, a product of dethiobiotin synthase (encoded by bioD), the third enzyme in the biotin biosynthesis pathway, to biotin. Biotin is an indispensable nutrient found in all living cells. Microorganisms, plants and a few fungi (most fungi obtain it from the environment) are …

WebJun 13, 2005 · Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism. Gene Name bioB Uniprot … Webwere included. See Data S1 for genomic and taxonomic data. Author: 15716_sing Created Date: 03/23/2024 23:15:00 Last modified by: 15716_sing

In enzymology, a dethiobiotin synthase (EC 6.3.3.3) is an enzyme that catalyzes the chemical reaction ATP + 7,8-diaminononanoate + CO2 ADP + phosphate + dethiobiotin The 3 substrates of this enzyme are ATP, 7,8-diaminononanoate, and CO2, whereas its 3 products are ADP, phosphate, and dethiobiotin. WebJan 13, 1994 · Strands 1, 4, 5, and 6 form the classic mononucleotide-binding motif as found in other ATP- and GTP-binding proteins. Dethiobiotin synthase from E. coli is a dimer built up of two identical subunits. The dimer is formed through packing along a molecular two-fold axis, which in the crystals coincides with the crystallographic two-fold axis.

WebMar 9, 2024 · biotin synthase. GeneRIFs: Gene References Into Functions. In biotin synthase, abstraction of a hydrogen atom from the C9 methyl group of dethiobiotin results in formation of a dethiobiotinyl methylene carbon radical, which is quenched by a sulfur atom to form a new carbon-sulfur bond in 9-mercaptodethiobiotin.

Webdethiobiotin synthase. DTB synthetase. (7R,8S)-7,8-diammoniononanoate + ATP + CO2 <=> (4R,5S)-dethiobiotin + ADP + 3 H (+) + phosphate. CTP has half the activity of … can running backs throw a passWebBiotin synthase, a member of the ‘radical SAM’ (S-adenosylmethionine) family, converts DTB (dethiobiotin) into biotin. The active form of the Escherichia coli enzyme contains two (Fe-S ... can running a red light increase insuranceWebDethiobiotin. The conversion of dethiobiotin (4) into biotin (5), which is catalyzed by biotin synthase, is the most novel step in biotin biosynthesis since it involves the formal … can running a humidifier cause pneumoniaWebAug 17, 2024 · Mycobacterium tuberculosis dethiobiotin synthase ( Mt DTBS) is a crucial enzyme involved in the biosynthesis of biotin in the causative agent of tuberculosis, M. tuberculosis .Here, we report a binder of Mt DTBS, cyclopentylacetic acid 2 ( K D = 3.4 ± 0.4 mM), identified via in silico screening. X-ray crystallography showed that 2 binds in the … flannel and dress outfitsWebSep 5, 1995 · Dethiobiotin Synthetase: The Carbonylation of 7,8-Diaminononanoic Acid Proceeds Regiospecifically via the N7-Carbamate. Biochemistry 1995, 34 (35) , 10976-10984. can running cause bradycardiaWebGSE12663: virulence determinants of Francisella tularensis revealed by transcriptional profiling inside macrophages: GSE42863: Flagellar export apparatus protein, FliH, is involved in post-transcriptional regulation of FlaB, motility and virulence of the relapsing fever spirochete Borrelia hermsii flannel and fishnet tightsWebMar 3, 1998 · HPLC analysis of reaction mixtures revealed the presence of a compound with the characteristics of an intermediate: (1) it was labelled with 14C, and therefore derived from the [14C]dethiobiotin substrate; (2) it was present only in reaction mixtures containing biotin synthase; (3) it was not derived from [14C]biotin; (4) 35S from [35S]cystine ... can running a humidifier cause mold